cutFile |
Cut a file and return individual columns |
inputEx |
A fictitious aCGH data set |
inputEx-sp |
A fictitious aCGH data set |
inputEx.nona |
A fictitious aCGH data set |
inputToADaCGH |
Convert CGH data to ff or RAM objects for use with ADaCGH2 |
outputToCGHregions |
ADaCGH2 output as input to CGHregions |
pChromPlot |
Segment plots for aCGH as PNG |
pSegment |
Parallelized/"unified" versions of several aCGH segementation algorithms/methods |
pSegmentCGHseg |
Parallelized/"unified" versions of several aCGH segementation algorithms/methods |
pSegmentDNAcopy |
Parallelized/"unified" versions of several aCGH segementation algorithms/methods |
pSegmentGLAD |
Parallelized/"unified" versions of several aCGH segementation algorithms/methods |
pSegmentHaarSeg |
Parallelized/"unified" versions of several aCGH segementation algorithms/methods |
pSegmentHMM |
Parallelized/"unified" versions of several aCGH segementation algorithms/methods |
pSegmentWavelets |
Parallelized/"unified" versions of several aCGH segementation algorithms/methods |